STAT4 and the Risk of Rheumatoid Arthritis and Systemic Lupus Erythematosus
Elaine F. Remmers, Ph.D., Robert M. Plenge, M.D., Ph.D., Annette T. Lee, Ph.D., Robert R. Graham, Ph.D., Geoffrey Hom, Ph.D., Timothy W. Behrens, M.D., Paul I.W. de Bakker, Ph.D., Julie M. Le, B.S., Hye-Soon Lee, M.D., Ph.D., Franak Batliwalla, Ph.D., Wentian Li, Ph.D., Seth L. Masters, Ph.D., Matthew G. Booty, B.S., John P. Carulli, Ph.D., Leonid Padyukov, M.D., Ph.D., Lars Alfredsson, Ph.D., Lars Klareskog, M.D., Ph.D., Wei V. Chen, M.S., Christopher I. Amos, Ph.D., Lindsey A. Criswell, M.D., M.P.H., Michael F. Seldin, M.D., Ph.D., Daniel L. Kastner, M.D., Ph.D., and Peter K. Gregersen, M.D.
Background Rheumatoid arthritis is a chronic inflammatory diseasewith a substantial genetic component. Susceptibility to diseasehas been linked with a region on chromosome 2q.
Methods We tested single-nucleotide polymorphisms (SNPs) inand around 13 candidate genes within the previously linked chromosome2q region for association with rheumatoid arthritis. We thenperformed fine mapping of the STAT1–STAT4 region in atotal of 1620 case patients with established rheumatoid arthritisand 2635 controls, all from North America. Implicated SNPs werefurther tested in an independent case–control series of1529 patients with early rheumatoid arthritis and 881 controls,all from Sweden, and in a total of 1039 case patients and 1248controls from three series of patients with systemic lupus erythematosus.
Results A SNP haplotype in the third intron of STAT4 was associatedwith susceptibility to both rheumatoid arthritis and systemiclupus erythematosus. The minor alleles of the haplotype-definingSNPs were present in 27% of chromosomes of patients with establishedrheumatoid arthritis, as compared with 22% of those of controls(for the SNP rs7574865, P=2.81x10–7; odds ratio for havingthe risk allele in chromosomes of patients vs. those of controls,1.32). The association was replicated in Swedish patients withrecent-onset rheumatoid arthritis (P=0.02) and matched controls.The haplotype marked by rs7574865 was strongly associated withlupus, being present on 31% of chromosomes of case patientsand 22% of those of controls (P=1.87x10–9; odds ratiofor having the risk allele in chromosomes of patients vs. thoseof controls, 1.55). Homozygosity of the risk allele, as comparedwith absence of the allele, was associated with a more thandoubled risk for lupus and a 60% increased risk for rheumatoidarthritis.
Conclusions A haplotype of STAT4 is associated with increasedrisk for both rheumatoid arthritis and systemic lupus erythematosus,suggesting a shared pathway for these illnesses.
Rheumatoid arthritis is the most common cause of adult inflammatoryarthritis and is associated with considerable disability andearly mortality.1 Studies of twins clearly show a genetic contributionto disease susceptibility,2 and the siblings of patients withseropositive, erosive rheumatoid arthritis have an estimatedrisk of developing the disease of between 5 and 10 times thatof the general population.3 The highly polymorphic HLA regionis a major contributor to genetic risk of rheumatoid arthritis.4Several other genes associated with more modest risks have recentlybeen identified, including the Arg620Trp variant of the intracellularphosphatase gene PTPN22.5,6 However, the definitive identificationof additional risk genes outside the HLA region has been challenging.
We recently described a linkage peak with nearly genomewidesignificance on the long (q) arm of chromosome 2 in 642 familiesof European ancestry7 collected by the North American RheumatoidArthritis Consortium (NARAC).8 The region encompasses more than50 million base pairs (Mb) of genomic DNA and has also beenimplicated in previous meta-analyses of linkage-study data.9,10In the current study, we undertook a large case–controldisease-association analysis of 13 selected candidate geneswithin the chromosome 2q linkage region.
Methods
Subjects
The NARAC case–control series included one affected member(the proband, if a DNA sample from the proband was available)of each family of European descent from the NARAC collectionof affected sibling pairs7,8 and unrelated controls of self-identifiedEuropean ancestry from the New York Cancer Project11 (www.amdec.org/amdec_initiatives/nycp.html).The rheumatoid arthritis replication series consisted of singletoncase patients with rheumatoid arthritis who were positive foranti–cyclic citrullinated peptide antibody, obtained throughthe Wichita Rheumatic Disease Data Bank,12 the National InceptionCohort of Rheumatoid Arthritis Patients,13 and the Study ofNew Onset Rheumatoid Arthritis,14 and additional unrelated controlsof European descent obtained from the New York Cancer Project.The Swedish case–control series included case patientsand controls from the Epidemiological Investigation of RheumatoidArthritis Swedish inception cohort.15,16
Case patients with lupus were obtained from three sources: theUniversity of California at San Francisco (UCSF) patients wereparticipants in the UCSF Lupus Genetics Project17 and were recruitedfrom UCSF Arthritis Clinics or from private rheumatology practicesin northern California or by means of nationwide outreach. Medicalrecords were reviewed to confirm that subjects met the criteriaof the American College of Rheumatology (ACR) for lupus.18 TheAutoimmune Biomarkers Collaborative Network (ABCoN) patientswere recruited from the Hopkins Lupus Cohort19 under the auspicesof ABCoN20 and also met the criteria of the ACR for lupus. Datafrom the Hopkins historical database were used to determinefulfillment of ACR criteria. The Multiple Autoimmune DiseasesGenetics Consortium (MADGC) patients were part of the MADGCcollection.21 The diagnosis of lupus based on ACR criteria wasconfirmed either by the treating physician or by the reviewof medical records. These three series included only case patientsof self-described European descent from the aforementioned collections.The controls were additional subjects of self-reported Europeanancestry from the New York Cancer Project.
The numbers of case patients and controls in the three rheumatoidarthritis and the three lupus case–control series arelisted in Table 1. The institutional review boards of all investigativeinstitutions approved these studies, and all participants providedwritten informed consent.
Table 1. Case–Control Series for Rheumatoid Arthritis and Systemic Lupus Erythematosus.
Candidate Genes and Selection of Single-Nucleotide Polymorphisms
We selected candidate genes from within a linkage region of52 Mb on chromosome 2q (the 2-LOD support interval) that wedefined previously.7 For each selected gene, we initially usedHapMap Phase I data to identify tag single-nucleotide polymorphisms(SNPs) that captured the majority of the then-known common SNPvariation (i.e., that present on 5% of chromosomes) in the gene(defined as the sequence ranging from 10 kb upstream of thecoding sequence to 10 kb downstream) using an r2 threshold of0.8 or greater. (The r2 correlation coefficient is a measureof linkage disequilibrium determined by the allelic correlationbetween SNPs; if r2=1, the markers are perfect predictors ofone another.) Some SNPs were not genotyped directly; rather,their imputed genotypes were inferred from multimarker combinations22(see Fig. S1 in the Supplementary Appendix, available with thefull text of this article at www.nejm.org).
For fine mapping of the STAT1–STAT4 region, we used HapMapPhase II data to select additional SNPs that captured the majorityof the known common variation in the region and that had a pairwiser2 of more than 0.8. We also included all nonsynonymous codingSNPs reported in dbSNP, the SNP database of the National Centerfor Biotechnology Information; all SNPs within motifs conservedacross species that were identified with the use of the Universityof California at Santa Cruz (UCSC) genome browser phastCons(conserved-elements track) (http://genome.ucsc.edu); and SNPsdisrupting putative transcription-factor binding sites, identifiedwith the use of the UCSC human–mouse–rat conservedtranscription-factor binding sites track (http://genome.ucsc.edu).
Genotyping
DNA samples were obtained from all subjects. The samples weregenotyped by means of one of two methods: a custom, highly multiplexed,bead-based array method, GoldenGate Genotyping (Illumina), anda multiplexed primer-extension method (Sequenom) (for details,see the Supplementary Appendix).
Statistical Analysis
All SNPs were tested for significant deviation from Hardy–Weinbergequilibrium in controls. Those with P values of less than 0.005were removed from the analysis. We also removed all SNPs witha minor allele frequency of less than 0.01, because of the reducedpower to detect associations for rare SNPs. The remaining SNPs(including the imputed SNPs) were analyzed for an associationwith disease by means of comparison of the minor allele frequencyin case patients and controls, with significance determinedby means of a chi-square test. Odds ratios, and their 95% confidenceintervals, for having the risk allele in chromosomes of casepatients as compared with those of controls were also determinedfor selected SNPs.23 When combining data from different case–controlseries, we used a Mantel–Haenszel test (SPSS software,version 12.0.0; www.spss.com) to summarize the stratum-specificestimates.
Linkage-disequilibrium patterns in the STAT1–STAT4 regionwere determined with the use of Haploview software, version3.32.24 The genotypes of 768 SNPs informative about Europeanancestry25 were used to adjust for the possibility of unmatchedpopulation structure in the case patients and the controls;STRAT software was used for structured association26 and EIGENSTRATsoftware for the correction of association-study results accordingto a method based on principal-components analysis.27
Results
Candidate-Gene Screening in the Chromosome 2q Linkage Region
We examined the 2-LOD support interval (Figure 1A) of the previouslyidentified7 linkage peak on chromosome 2 for the presence ofgenes that might influence rheumatoid arthritis. We evaluated13 candidate genes (Figure 1B; for further description, seeTable S1 in the Supplementary Appendix). Association resultsfor 82 tag or imputed SNPs within the selected candidate genesfrom an initial set of 525 independent case patients with rheumatoidarthritis and 1165 unrelated controls are shown in Figure 1B.In addition to a known association with a SNP in CTLA428 (rs3087243,P=0.008), we found an association with an unlinked SNP (located15 Mb away; r2=0) in STAT4 (rs7574865, P=0.002).
Figure 1. Linkage Peak for Rheumatoid Arthritis on Chromosome 2q and Initial Screen of Candidate Genes for Disease-Associated SNPs in the North American Rheumatoid Arthritis Consortium Case–Control Series.
Panel A shows previously determined linkage data for SNPs on chromosome 2. The black bar represents the 2-LOD support interval, containing candidate genes selected for analysis. Panel B shows the significance of the association data (presented as 1 divided by the P value) for 68 tag SNPs (solid diamonds) and 14 imputed SNPs (open diamonds) in 525 case patients and 1165 controls. The black bars represent the 13 candidate genes evaluated. The candidate-gene SNPs are shown in their physical order across the region, evenly spaced rather than according to their chromosomal position. The imputed SNP in STAT4 found to be associated with rheumatoid arthritis was confirmed by direct genotyping.
Fine Mapping of Associations with Rheumatoid Arthritis in the STAT1–STAT4 Region
The most significantly (P=0.002) associated SNP in the region,rs7574865, is in a linkage-disequilibrium block that extendsfrom the middle of the STAT4 locus to the 3' end of the gene(Figure 2). There was, however, some evidence of longer-rangedisequilibrium that extended into STAT1 from the 3' end of STAT4.We therefore included both genes in the fine mapping and infurther analyses.
Figure 2. Linkage Disequilibrium Surrounding the STAT4 SNP Found to be Associated with Rheumatoid Arthritis.
Linkage disequilibrium between pairs of SNPs across the STAT1–STAT4 region is shown within the HapMap CEU population data (from persons of northern and western European ancestry). Blocks connecting pairs of SNPs are shaded according to the strength of the linkage disequilibrium between the SNPs, from 0.0 (white) to 1.0 (bright red), as measured by the disequilibrium coefficient D'. The lavender blocks indicate pairs of markers for which D' is equal to 1.0 but the LOD score is less than 2.0. The imputed STAT4 SNP, rs7574865, associated with rheumatoid arthritis is shown within the rectangle outlined in black. This SNP and three others (asterisks) were associated with disease susceptibility in both North American rheumatoid arthritis case–control series. The locations of the STAT1 and STAT4 genes are indicated by the blue arrows (pointing in the direction of transcription). The region selected for fine mapping is located between the black arrowheads.
To map the location of the association with rheumatoid arthritis,we successfully genotyped the case patients and controls inthe NARAC series for 63 SNPs located within the 209-kb STAT1–STAT4region (average density, one SNP per 3.1 kb). These 63 SNPscaptured 87% of the common variation (defined as a minor allelefrequency of 0.05) in the HapMap Phase II data in the region,with an r2 value of more than 0.8. Four SNPs located withinthe large third intron of STAT4 had associations with rheumatoidarthritis with P values of less than 0.001. The most significantP value, 8.29x10–5, was found for rs7574865 (Table 2).The four disease-associated SNPs were in strong linkage disequilibrium(r2>0.97), and all had a minor allele frequency of 0.28 inthe NARAC case patients with rheumatoid arthritis, as comparedwith 0.22 in the unrelated controls. Results for the completeset of 63 SNPs are given in Table S2 in the Supplementary Appendix.
Table 2. Associations of the SNP rs7574865 with Rheumatoid Arthritis.
Replication of Associations of Variants in STAT4 with Rheumatoid Arthritis
To confirm the associations found in the STAT1–STAT4 region,we genotyped subjects in the rheumatoid arthritis replicationseries for the same 63 SNPs. Among the case patients, we genotypedonly those who were positive for anti–cyclic citrullinatedpeptide antibody, to minimize disease heterogeneity in thissingleton case series. Four variants within intron 3 of STAT4— the same four identified in our initial findings —were strongly associated with rheumatoid arthritis (e.g., rs7574865,P=6.26x10–4) (Table 2). The complete results for the rheumatoidarthritis replication series are listed in Table S3 in the Supplementary Appendix.
We also performed analyses of the 63 SNPs in the combined NARACand rheumatoid arthritis replication series (Figure 3). In acombined Mantel–Haenszel analysis, the SNP most stronglyassociated with rheumatoid arthritis in the NARAC series, rs7574865,had a minor allele frequency of 0.27 in case patients and 0.22in controls (P=2.81x10–7; odds ratio for having the riskallele in chromosomes of patients vs. those of controls, 1.32;95% confidence interval [CI], 1.19 to 1.46).
Figure 3. Associations of STAT1–STAT4 SNPs with Disease Susceptibility in Two North American Rheumatoid Arthritis Case–Control Series.
The significance of the associations (presented as 1 divided by the P value) is shown for 63 SNPs in the STAT1–STAT4 region, shown according to chromosomal position (from the Human March 2006 assembly of the University of California at Santa Cruz Genome Browser [hg18], National Center for Biotechnology Information build 36). The five SNPs with P values of less than 1x10–5 are labeled. The locations of the STAT1 and STAT4 genes are indicated by the blue arrows (pointing in the direction of transcription). Vertical black bars on the arrows represent the locations of exons. The association data are from the 1620 case patients and the 2635 controls in the North American Rheumatoid Arthritis Consortium series and the rheumatoid arthritis replication series.
We genotyped the most significantly associated SNP from theNARAC case–control series, rs7574865, in 1529 case patientswith recent-onset rheumatoid arthritis and in 881 controls fromthe Swedish Epidemiological Investigation of Rheumatoid Arthritisseries. In this independent series, the minor allele frequencyof rs7574865 was significantly greater in the case patientsthan in the controls (P=0.02) (Table 2). The minor allele frequencyfor rs7574865 was lower in the Swedish patients with early rheumatoidarthritis (0.25) than in the North American patients with establishedrheumatoid arthritis (0.27), whereas the frequency in the controlswas the same in both series (0.22).
A meta-analysis of the three independent case–controlseries for rheumatoid arthritis yielded strong evidence of anassociation of the minor allele of rs7574865 with disease susceptibility(P=4.64x10–8). The odds ratio for having the risk allelein chromosomes of case patients as compared with those of controlswas 1.27 (Table 2). Genotypic odds ratios for patients as comparedwith controls were 1.61 (95% CI, 1.28 to 2.03) for homozygotesand 1.27 (95% CI, 1.14 to 1.41) for heterozygotes.
In the NARAC patients with rheumatoid arthritis, of which 81%were positive for anti–cyclic citrullinated peptide antibody,the rs7574865 minor allele frequency did not differ significantly(P>0.05) in the subgroup that was positive for the antibody(0.28) and the subgroup that was negative for the antibody (0.27).Logistic-regression analysis after accounting for the rs7574865genotype in the combined NARAC and rheumatoid arthritis replicationseries showed that this one SNP could explain the signal acrossthe STAT1–STAT4 region (data not shown). Furthermore,after accounting for the CTLA4 SNP associated with rheumatoidarthritis (rs3087243), the result for the STAT4 rs7574865 remainedsignificant. Thus, we concluded that the STAT4 SNP, or a variantin tight linkage disequilibrium with it, confers increased susceptibilityto the development of rheumatoid arthritis.
Correction for Differences between Case Patients and Controls
To address the possibility that case–control analysesmay yield spurious associations due to undetected differencesin population admixture or population substructure between casepatients and controls, we genotyped the rheumatoid arthritisreplication series for 768 SNPs informative about European ancestry,located throughout the genome. There was still strong evidenceof association according to a structured association analysis(with STRAT software) (P=5x10–5) and an analysis usingEIGENSTRAT software with correction for the four most significantprincipal components (P=2x10–5). Furthermore, when thegenotypes of the SNPs informative about European ancestry wereused to distinguish controls of predominantly northern Europeanancestry from those of predominantly southern European ancestry,we found an rs7574865 minor allele frequency of 0.22 in bothgroups, indicating that this allele frequency does not varysignificantly between these subgroups (P>0.05).
Association of the STAT4 Variant with Systemic Lupus Erythematosus
Since STAT4 lies within linkage peaks that have also been reportedin patients with lupus,29,30,31 three lupus series of case andcontrol subjects of European ancestry were also genotyped. Wefound that the minor allele frequency for rs7574865 was significantlyincreased in all three series among patients (0.29 to 0.31)as compared with controls (0.22 to 0.23) (P=9.56x10–6to P=0.03) (Table 3). In a meta-analysis of the three series,we found strong evidence of association of the rs7574865 minorallele with lupus (P=1.87x10–9). The odds ratio for havingthe allele associated with lupus in chromosomes of patientsas compared with those of controls was 1.55 (Table 3). Genotypicodds ratios were 2.41 (95% CI, 1.66 to 3.49) for homozygotesand 1.56 (95% CI, 1.30 to 1.88) for heterozygotes.
Table 3. Associations of the SNP rs7574865 with Systemic Lupus Erythematosus.
Discussion
We have shown that a variant allele of STAT4 confers an increasedrisk for both rheumatoid arthritis and systemic lupus erythematosus.This finding provides support for the evolving concept thatcommon risk genes underlie multiple autoimmune disorders andsuggests the involvement of common pathways of pathogenesisamong these different diseases.32
STAT4 encodes a transcription factor that transmits signalsinduced by several key cytokines, including interleukin-12 andtype 1 interferons, as well as interleukin-23.33 STAT4 is alatent cytosolic factor that, after activation by cytokines,is phosphorylated and accumulates in the nucleus. ActivatedSTAT4 stimulates transcription of specific genes including interferon-,a key indicator of T-cell differentiation into type 1 helperT (Th1) cells. Therefore, STAT4-dependent signaling by interleukin-12receptors plays a critical role in the development of a Th1-typeT-cell response.34,35
STAT4 has also been implicated in the optimal differentiationof a newly defined CD4+ T-cell lineage, designated Th17 cells.Dependent in part on the activity of interleukin-23, a cytokinerelated to interleukin-12,36 proinflammatory Th17 cells canplay an important, if not predominant, role in chronic inflammatorydisorders.37 Indeed, experiments that have targeted Th1 cellsin models of autoimmune disease have often unwittingly targetedthe Th17 lineage, because the key cytokines of the two lineages,interleukin-12 and interleukin-23, and their receptors sharecommon subunits.33
STAT4, a central player in both lineages, has proved to playa crucial role in experimental models of autoimunity. STAT4-deficientmice are generally resistant to models of autoimmune disease,including arthritis.38 Furthermore, specific targeting of STAT4by inhibitory oligodeoxynucleotides or antisense oligonucleotidescan ameliorate disease in arthritis models,39,40 suggestingthe utility of STAT4 as a therapeutic target.
Recent genetic data have shown that interleukin-23–receptorvariants are associated with susceptibility to both Crohn'sdisease41 and psoriasis42; interleukin-12 polymorphisms havealso been associated with a risk of psoriasis.42,43 Since bothinterleukin-12 and interleukin-23 act through STAT4, these dataimply that a complex pattern of alterations in related pathwayscan lead to various forms of autoimmunity and chronic inflammation.STAT4 is also required for signaling in mature dendritic cellsin response to type 1 interferons.44,45 Thus, there may be multiplemechanisms by which genetic variation in STAT4 can influenceimmune responses and predispose persons to autoimmunity. Indeed,in a murine model of lupus, STAT4 deficiency is associated withaccelerated nephritis and increased mortality,46 in contrastto the protective effects in arthritis models.38
Several family-based genome scans have revealed linkage of thechromosome 2q region with lupus, as well as with rheumatoidarthritis.29,30,31 We therefore extended our association studiesto three independent lupus case–control series and foundstrong evidence that the STAT4 variant associated with rheumatoidarthritis was also associated with lupus. The identificationof STAT4 as a common predisposition gene for both lupus andrheumatoid arthritis is similar to reported findings of broadassociations of the intracellular phosphatase PTPN22 with theseand other autoimmune diseases,6 such as type 1 diabetes mellitus,47autoimmune thyroid disease,21 and myasthenia gravis.48 Clearly,the role of STAT4 in these other disorders should be examined.In addition, the influence of allelic variation on subgroups,manifestations, and outcomes of disease may shed further lighton disease mechanisms. The majority of the North American patientswith rheumatoid arthritis in our study had long-standing erosivedisease, whereas the Swedish patients generally had diseaseof more recent onset. This may explain the somewhat weaker STAT4association in the Swedish series. Given that lupus is a highlyheterogeneous disorder, it will be important to study STAT4polymorphisms in clinical subgroups, and in view of the knockoutmouse data, this is particularly true with regard to the developmentof nephritis.
Genetic case–control studies such as ours must be carriedout with careful attention to the possibility of false positiveresults, as has been emphasized elsewhere.49 First, multiplereplication is essential for certainty about the basic findings.In addition, studies using unrelated case–control seriesrun the risk of yielding spurious associations if there areunidentified differences in population structure between casepatients and controls.25,50 To address this possibility, wegenotyped the 1013 case patients and the 1326 controls in therheumatoid arthritis replication series for 768 ancestry-informativeSNPs that were selected for reflecting differences in allelefrequency among European subgroups25 and used two methods tocontrol for such stratification. These methods did not reducethe significance of the association with disease. The associationwas probably robust to this correction because the allele frequencyof the disease-associated STAT4 SNP does not vary among Europeansubgroups.
Association studies cannot distinguish among multiple variantsin strong linkage disequilibrium with one another, and a haplotypecontaining several variants could be required to confer a biologiceffect. SNPs known to be in strong linkage disequilibrium withrs7574865, on the basis of HapMap CEU data, are listed in TableS4 in the Supplementary Appendix. All these variants are locatedin the third intron of the STAT4 gene, suggesting that splicevariation or regulatory effects may explain the gene's associationwith disease. Studies are under way to investigate these possibilitiesin various types of cells, including T cells, monocytes, macrophages,and dendritic cells. In addition, a complete resequencing ofthe STAT4 gene may yet reveal additional risk alleles. Nevertheless,even in the absence of precise molecular mechanisms, the discoveryof these new disease associations with STAT4 should generatea variety of new hypotheses about the pathogenesis of autoimmunity.
Note added in proof: The association of STAT4 with rheumatoidarthritis has now been replicated in a Korean population.51
Supported by grants from the National Institutes of Health (N01-AR-1-2256,N01-AI95386, R01 AR44422, and N01-AR-2-2263, to Dr. Gregersen;R01 AR050267, to Dr. Seldin; and R01 AR052300 and R01 AR-44804,to Dr. Criswell), the Rosalind Russell Medical Research Centerfor Arthritis and the Kirkland Scholar Award (to Dr. Criswell),the Arthritis Foundation, the Boas Family, the Eileen LudwigGreenland Center for Rheumatoid Arthritis, and the IntramuralResearch Program of the National Institute of Arthritis andMusculoskeletal and Skin Diseases. The work was carried outin part at the General Clinical Research Center, Moffitt Hospital,University of California at San Francisco (UCSF), and at theGeneral Clinical Research Center Feinstein Institute for MedicalResearch (FIMR), with grants from the National Center for ResearchResources, Public Health Service (5-M01-RR-00079, to UCSF, andM01 RR018535).
Dr. Plenge reports receiving consulting fees from Biogen Idecand lecture fees from Genentech. Drs. Hom and Behrens reportbeing employees of Genentech; and Dr. Carulli, an employee ofBiogen Idec. Dr. Criswell reports receiving consulting feesfrom Celera Diagnostics. Dr. Gregersen reports serving on theAbbott Scholar Award Advisory Committee and receiving honorariafrom Biogen Idec, Genentech, and Roche Pharmaceuticals. No otherpotential conflict of interest relevant to this article wasreported.
We thank the large number of investigators, practicing physicians,and research nurses who contributed data from their patientsto the various collections used in our studies, including Dr.Michelle Petri for the Autoimmune Biomarkers Collaborative Network(ABCoN); Drs. Elena Massarotti, Claire Bombardier, and MichaelWeisman for the Study of New Onset Rheumatoid Arthritis (SONORA);the Multiple Autoimmune Diseases Genetics Consortium (MADGC);Marlena Kern, R.N., for the North American Rheumatoid ArthritisConsortium (NARAC); and Dr. Frederick Wolfe for the NationalData Bank for Rheumatic Diseases, Wichita, Kansas, and the NationalInception Cohort of Rheumatoid Arthritis patients. We also thankDr. John O'Shea for thoughtful comments on an earlier versionof this manuscript.
Source Information
From the National Institute of Arthritis and Musculoskeletal and Skin Diseases, Bethesda, MD (E.F.R., J.M.L., S.L.M., M.G.B., D.L.K.); the Broad Institute, Cambridge, MA (R.M.P., R.R.G., P.I.W.B.); Brigham and Women's Hospital (R.M.P.); the Feinstein Institute for Medical Research, Manhasset, NY (A.T.L., H.-S.L., F.B., W.L., P.K.G.); Genentech, South San Francisco, CA (G.H., T.W.B.); Hanyang University College of Medicine, Seoul, South Korea (H.-S.L.); Biogen Idec, Cambridge, MA (J.P.C.); the Karolinska Institutet, Stockholm (L.P., L.A., L.K.); University of Texas M.D. Anderson Cancer Center, Houston (W.V.C., C.I.A.); the University of California at San Francisco, San Francisco (L.A.C.); and the University of California at Davis, Davis (M.F.S.). Drs. Remmers and Plenge contributed equally to this article.
Address reprint requests to Dr. Gregersen at the Feinstein Institute for Medical Research, 350 Community Dr., Manhasset, NY 11030, or at peterg{at}nshs.edu.
References
Goronzy J, Weyand C. Rheumatoid arthritis. A. Epidemiology, pathology, and pathogenesis. In: Klippel J, Crofford L, Stone J, Weyand C, eds. Primer on the rheumatic diseases. 12th ed. Atlanta: Arthritis Foundation, 2001:209-17.
MacGregor AJ, Snieder H, Rigby AS, et al. Characterizing the quantitative genetic contribution to rheumatoid arthritis using data from twins. Arthritis Rheum 2000;43:30-37. [CrossRef][Web of Science][Medline]
Seldin MF, Amos CI, Ward R, Gregersen PK. The genetics revolution and the assault on rheumatoid arthritis. Arthritis Rheum 1999;42:1071-1079. [CrossRef][Web of Science][Medline]
Wordsworth BP, Bell JI. The immunogenetics of rheumatoid arthritis. Springer Semin Immunopathol 1992;14:59-78. [Web of Science][Medline]
Begovich AB, Carlton VE, Honigberg LA, et al. A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritis. Am J Hum Genet 2004;75:330-337. [CrossRef][Web of Science][Medline]
Gregersen PK, Lee HS, Batliwalla F, Begovich AB. PTPN22: setting thresholds for autoimmunity. Semin Immunol 2006;18:214-223. [CrossRef][Web of Science][Medline]
Amos CI, Chen WV, Lee A, et al. High-density SNP analysis of 642 Caucasian families with rheumatoid arthritis identifies two new linkage regions on 11p12 and 2q33. Genes Immun 2006;7:277-286. [CrossRef][Web of Science][Medline]
Jawaheer D, Seldin MF, Amos CI, et al. Screening the genome for rheumatoid arthritis susceptibility genes: a replication study and combined analysis of 512 multicase families. Arthritis Rheum 2003;48:906-916. [CrossRef][Web of Science][Medline]
Choi SJ, Rho YH, Ji JD, Song GG, Lee YH. Genome scan meta-analysis of rheumatoid arthritis. Rheumatology (Oxford) 2006;45:166-170. [CrossRef][Medline]
Etzel CJ, Chen WV, Shepard N, et al. Genome-wide meta-analysis for rheumatoid arthritis. Hum Genet 2006;119:634-641. [CrossRef][Web of Science][Medline]
Mitchell MK, Gregersen PK, Johnson S, Parsons R, Vlahov D. The New York Cancer Project: rationale, organization, design, and baseline characteristics. J Urban Health 2004;81:301-310. [Web of Science][Medline]
Wolfe F, Michaud K, Gefeller O, Choi HK. Predicting mortality in patients with rheumatoid arthritis. Arthritis Rheum 2003;48:1530-1542. [CrossRef][Web of Science][Medline]
Fries JF, Wolfe F, Apple R, et al. HLA-DRB1 genotype associations in 793 white patients from a rheumatoid arthritis inception cohort: frequency, severity, and treatment bias. Arthritis Rheum 2002;46:2320-2329. [CrossRef][Web of Science][Medline]
Irigoyen P, Lee AT, Wener MH, et al. Regulation of anti-cyclic citrullinated peptide antibodies in rheumatoid arthritis: contrasting effects of HLA-DR3 and the shared epitope alleles. Arthritis Rheum 2005;52:3813-3818. [CrossRef][Web of Science][Medline]
Stolt P, Bengtsson C, Nordmark B, et al. Quantification of the influence of cigarette smoking on rheumatoid arthritis: results from a population based case-control study, using incident cases. Ann Rheum Dis 2003;62:835-841. [Free Full Text]
Padyukov L, Silva C, Stolt P, Alfredsson L, Klareskog L. A gene-environment interaction between smoking and shared epitope genes in HLA-DR provides a high risk of seropositive rheumatoid arthritis. Arthritis Rheum 2004;50:3085-3092. [CrossRef][Web of Science][Medline]
Thorburn CM, Prokunina-Olsson L, Sterba KA, et al. Association of PDCD1 genetic variation with risk and clinical manifestations of systemic lupus erythematosus in a multiethnic cohort. Genes Immun 2007;8:279-287. [CrossRef][Web of Science][Medline]
Tan EM, Cohen AS, Fries JF, et al. The 1982 revised criteria for the classification of systemic lupus erythematosus. Arthritis Rheum 1982;25:1271-1277. [Web of Science][Medline]
Bauer JW, Baechler EC, Petri M, et al. Elevated serum levels of interferon-regulated chemokines are biomarkers for active human systemic lupus erythematosus. PLoS Med 2006;3:e491-e491. [CrossRef][Medline]
Criswell LA, Pfeiffer KA, Lum RF, et al. Analysis of families in the Multiple Autoimmune Disease Genetics Consortium (MADGC) collection: the PTPN22 620W allele associates with multiple autoimmune phenotypes. Am J Hum Genet 2005;76:561-571. [CrossRef][Web of Science][Medline]
de Bakker PI, Yelensky R, Pe'er I, Gabriel SB, Daly MJ, Altshuler D. Efficiency and power in genetic association studies. Nat Genet 2005;37:1217-1223. [CrossRef][Web of Science][Medline]
Bland JM, Altman DG. Statistics notes: the odds ratio. BMJ 2000;320:1468-1468. [Free Full Text]
Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005;21:263-265. [Free Full Text]
Seldin MF, Shigeta R, Villoslada P, et al. European population substructure: clustering of northern and southern populations. PLoS Genet 2006;2:e143-e143. [CrossRef][Medline]
Pritchard JK, Stephens M, Rosenberg NA, Donnelly P. Association mapping in structured populations. Am J Hum Genet 2000;67:170-181. [CrossRef][Web of Science][Medline]
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet 2006;38:904-909. [CrossRef][Web of Science][Medline]
Plenge RM, Padyukov L, Remmers EF, et al. Replication of putative candidate-gene associations with rheumatoid arthritis in >4,000 samples from North America and Sweden: association of susceptibility with PTPN22, CTLA4, and PADI4. Am J Hum Genet 2005;77:1044-1060. [CrossRef][Web of Science][Medline]
Moser KL, Neas BR, Salmon JE, et al. Genome scan of human systemic lupus erythematosus: evidence for linkage on chromosome 1q in African-American pedigrees. Proc Natl Acad Sci U S A 1998;95:14869-14874. [Free Full Text]
Gray-McGuire C, Moser KL, Gaffney PM, et al. Genome scan of human systemic lupus erythematosus by regression modeling: evidence of linkage and epistasis at 4p16-15.2. Am J Hum Genet 2000;67:1460-1469. [CrossRef][Web of Science][Medline]
Cantor RM, Yuan J, Napier S, et al. Systemic lupus erythematosus genome scan: support for linkage at 1q23, 2q33, 16q12-13, and 17q21-23 and novel evidence at 3p24, 10q23-24, 13q32, and 18q22-23. Arthritis Rheum 2004;50:3203-3210. [CrossRef][Web of Science][Medline]
Gregersen PK, Behrens TW. Genetics of autoimmune disease -- disorders of immune homeostasis. Nat Rev Genet 2006;7:917-928. [CrossRef][Web of Science][Medline]
Watford WT, Hissong BD, Bream JH, Kanno Y, Muul L, O'Shea JJ. Signaling by IL-12 and IL-23 and the immunoregulatory roles of STAT4. Immunol Rev 2004;202:139-156. [CrossRef][Web of Science][Medline]
Morinobu A, Gadina M, Strober W, et al. STAT4 serine phosphorylation is critical for IL-12-induced IFN-gamma production but not for cell proliferation. Proc Natl Acad Sci U S A 2002;99:12281-12286. [Free Full Text]
Nishikomori R, Usui T, Wu CY, Morinobu A, O'Shea JJ, Strober W. Activated STAT4 has an essential role in Th1 differentiation and proliferation that is independent of its role in the maintenance of IL-12R beta 2 chain expression and signaling. J Immunol 2002;169:4388-4398. [Free Full Text]
Mathur AN, Chang HC, Zisoulis DG, et al. Stat3 and Stat4 direct development of IL-17-secreting Th cells. J Immunol 2007;178:4901-4907. [Free Full Text]
Bettelli E, Oukka M, Kuchroo VKT. T(H)-17 cells in the circle of immunity and autoimmunity. Nat Immunol 2007;8:345-350. [CrossRef][Web of Science][Medline]
Finnegan A, Grusby MJ, Kaplan CD, et al. IL-4 and IL-12 regulate proteoglycan-induced arthritis through Stat-dependent mechanisms. J Immunol 2002;169:3345-3352. [Free Full Text]
Klinman DM, Gursel I, Klaschik S, Dong L, Currie D, Shirota H. Therapeutic potential of oligonucleotides expressing immunosuppressive TTAGGG motifs. Ann N Y Acad Sci 2005;1058:87-95. [CrossRef][Web of Science][Medline]
Hildner KM, Schirmacher P, Atreya I, et al. Targeting of the transcription factor STAT4 by antisense phosphorothioate oligonucleotides suppresses collagen-induced arthritis. J Immunol 2007;178:3427-3436. [Free Full Text]
Duerr RH, Taylor KD, Brant SR, et al. A genome-wide association study identifies IL23R as an inflammatory bowel disease gene. Science 2006;314:1461-1463. [Free Full Text]
Cargill M, Schrodi SJ, Chang M, et al. A large-scale genetic association study confirms IL12B and leads to the identification of IL23R as psoriasis-risk genes. Am J Hum Genet 2007;80:273-290. [CrossRef][Web of Science][Medline]
Tsunemi Y, Saeki H, Nakamura K, et al. Interleukin-12 p40 gene (IL12B) 3'-untranslated region polymorphism is associated with susceptibility to atopic dermatitis and psoriasis vulgaris. J Dermatol Sci 2002;30:161-166. [CrossRef][Web of Science][Medline]
Fukao T, Frucht DM, Yap G, Gadina M, O'Shea JJ, Koyasu S. Inducible expression of Stat4 in dendritic cells and macrophages and its critical role in innate and adaptive immune responses. J Immunol 2001;166:4446-4455. [Free Full Text]
Remoli ME, Ragimbeau J, Giacomini E, et al. NF-B is required for STAT-4 expression during dendritic cell maturation. J Leukoc Biol 2007;81:355-363. [Free Full Text]
Jacob CO, Zang S, Li L, et al. Pivotal role of Stat4 and Stat6 in the pathogenesis of the lupus-like disease in the New Zealand mixed 2328 mice. J Immunol 2003;171:1564-1571. [Free Full Text]
Bottini N, Musumeci L, Alonso A, et al. A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes. Nat Genet 2004;36:337-338. [CrossRef][Web of Science][Medline]
Vandiedonck C, Capdevielle C, Giraud M, et al. Association of the PTPN22*R620W polymorphism with autoimmune myasthenia gravis. Ann Neurol 2006;59:404-407. [CrossRef][Web of Science][Medline]
Lohmueller KE, Pearce CL, Pike M, Lander ES, Hirschhorn JN. Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease. Nat Genet 2003;33:177-182. [CrossRef][Web of Science][Medline]
Campbell CD, Ogburn EL, Lunetta KL, et al. Demonstrating stratification in a European American population. Nat Genet 2005;37:868-872. [CrossRef][Web of Science][Medline]
Lee H-S, Remmers EF, Le JM, Kastner DL, Bae S-C, Gregersen PK. Association of STAT4 with rheumatoid arthritis in the Korean population. Mol Med (in press).
Allanore, Y., Dieude, P., Boileau, C.
(2009). Genetic background of systemic sclerosis: autoimmune genes take centre stage. Rheumatology (Oxford)
0: kep368v1-kep368
[Abstract][Full Text]
Kim, E. J., Collard, H. R., King, T. E. Jr
(2009). Rheumatoid Arthritis-Associated Interstitial Lung Disease: The Relevance of Histopathologic and Radiographic Pattern. Chest
136: 1397-1405
[Abstract][Full Text]
Coenen, M. J.H., Trynka, G., Heskamp, S., Franke, B., van Diemen, C. C., Smolonska, J., van Leeuwen, M., Brouwer, E., Boezen, M. H., Postma, D. S., Platteel, M., Zanen, P., Lammers, J.-W. W.J., Groen, H. J.M., Mali, W. P.T.M., Mulder, C. J., Tack, G. J., Verbeek, W. H.M., Wolters, V. M., Houwen, R. H.J., Mearin, M. L., van Heel, D. A., Radstake, T. R.D.J., van Riel, P. L.C.M., Wijmenga, C., Barrera, P., Zhernakova, A.
(2009). Common and different genetic background for rheumatoid arthritis and coeliac disease. Hum Mol Genet
18: 4195-4203
[Abstract][Full Text]
Kurreeman, F A S, Daha, N A, Chang, M, Catanese, J J, Begovich, A B, Huizinga, T W J, Toes, R E M
(2009). Association of IL2RA and IL2RB with rheumatoid arthritis: a replication study in a Dutch population. Ann Rheum Dis
68: 1789-1790
[Full Text]
Abelson, A-K, Delgado-Vega, A M, Kozyrev, S V, Sanchez, E, Velazquez-Cruz, R, Eriksson, N, Wojcik, J, Linga Reddy, M V P, Lima, G, D'Alfonso, S, Migliaresi, S, Baca, V, Orozco, L, Witte, T, Ortego-Centeno, N, the AADEA group, , Abderrahim, H, Pons-Estel, B A, Gutierrez, C, Suarez, A, Gonzalez-Escribano, M F, Martin, J, Alarcon-Riquelme, M E
(2009). STAT4 associates with systemic lupus erythematosus through two independent effects that correlate with gene expression and act additively with IRF5 to increase risk. Ann Rheum Dis
68: 1746-1753
[Abstract][Full Text]
Li, H., Zou, Q., Xie, Z., Liu, Y., Zhong, B., Yang, S., Zheng, P., Yang, F., Fang, Y., Wu, Y.
(2009). A haplotype in STAT4 gene associated with rheumatoid arthritis in Caucasians is not associated in the Han Chinese population, but with the presence of rheumatoid factor. Rheumatology (Oxford)
48: 1363-1368
[Abstract][Full Text]
McClure, A., Lunt, M., Eyre, S., Ke, X., Thomson, W., Hinks, A., Bowes, J., Gibbons, L., Plant, D., Wilson, A. G., Marinou, I., Morgan, A. W., Emery, P., BIRAC consortium, , Steer, S., Hocking, L. J., Reid, D. M., Wordsworth, P., Harrison, P., Worthington, J., Barton, A.
(2009). Investigating the viability of genetic screening/testing for RA susceptibility using combinations of five confirmed risk loci. Rheumatology (Oxford)
48: 1369-1374
[Abstract][Full Text]
KIYOHARA, C., WASHIO, M., HORIUCHI, T., TADA, Y., ASAMI, T., IDE, S., ATSUMI, T., KOBASHI, G., TAKAHASHI, H.
(2009). Cigarette Smoking, STAT4 and TNFRSF1B Polymorphisms, and Systemic Lupus Erythematosus in a Japanese Population. The Journal of Rheumatology
36: 2195-2203
[Abstract][Full Text]
Good, S. R., Thieu, V. T., Mathur, A. N., Yu, Q., Stritesky, G. L., Yeh, N., O'Malley, J. T., Perumal, N. B., Kaplan, M. H.
(2009). Temporal Induction Pattern of STAT4 Target Genes Defines Potential for Th1 Lineage-Specific Programming. J. Immunol.
183: 3839-3847
[Abstract][Full Text]
Meroni, P., Tincani, A, Alarcon-Riquelme, M., Shoenfeld, Y, Borghi, M.
(2009). European Forum on Antiphospholipid Antibodies: research in progress. Lupus
18: 924-929
[Abstract]
Rossol, M, Pierer, M, Arnold, S, Keysser, G, Burkhardt, H, Baerwald, C, Wagner, U
(2009). Homozygosity for DNASE2 single nucleotide polymorphisms in the 5'-regulatory region is associated with rheumatoid arthritis. Ann Rheum Dis
68: 1498-1503
[Abstract][Full Text]
HELLQUIST, A., JARVINEN, T. M., KOSKENMIES, S., ZUCCHELLI, M., ORSMARK-PIETRAS, C., BERGLIND, L., PANELIUS, J., HASAN, T., JULKUNEN, H., D'AMATO, M., SAARIALHO-KERE, U., KERE, J.
(2009). Evidence for Genetic Association and Interaction Between the TYK2 and IRF5 Genes in Systemic Lupus Erythematosus. The Journal of Rheumatology
36: 1631-1638
[Abstract][Full Text]
DIEGUEZ-GONZALEZ, R., AKAR, S., CALAZA, M., GONZALEZ-ALVARO, I., FERNANDEZ-GUTIERREZ, B., LAMAS, J. R., de la SERNA, A. R., CALIZ, R., BLANCO, F. J., PASCUAL-SALCEDO, D., VELLOSO, M. L., PEREZ-PAMPIN, E., PABLOS, J. L., NAVARRO, F., NARVAEZ, J., LOPEZ-LONGO, F. J., HERRERO-BEAUMONT, G., GOMEZ-REINO, J. J., GONZALEZ, A.
(2009). Lack of Association with Rheumatoid Arthritis of Selected Polymorphisms in 4 Candidate Genes: CFH, CD209, Eotaxin-3, and MHC2TA. The Journal of Rheumatology
36: 1590-1595
[Abstract][Full Text]
Horita, T, Atsumi, T, Yoshida, N, Nakagawa, H, Kataoka, H, Yasuda, S, Koike, T
(2009). STAT4 single nucleotide polymorphism, rs7574865 G/T, as a risk for antiphospholipid syndrome. Ann Rheum Dis
68: 1366-1367
[Full Text]
Tsuchiya, N, Kawasaki, A, Hasegawa, M, Fujimoto, M, Takehara, K, Kawaguchi, Y, Kawamoto, M, Hara, M, Sato, S
(2009). Association of STAT4 polymorphism with systemic sclerosis in a Japanese population. Ann Rheum Dis
68: 1375-1376
[Full Text]
Hollis-Moffatt, J E, Merriman, M E, Rodger, R A, Rowley, K A, Chapman, P T, Dalbeth, N, Gow, P J, Harrison, A A, Highton, J, Jones, P B B, O'Donnell, J L, Stamp, L K, Merriman, T R
(2009). Evidence for association of an interleukin 23 receptor variant independent of the R381Q variant with rheumatoid arthritis. Ann Rheum Dis
68: 1340-1344
[Abstract][Full Text]
Hirschfield, G. M., Liu, X., Xu, C., Lu, Y., Xie, G., Lu, Y., Gu, X., Walker, E. J., Jing, K., Juran, B. D., Mason, A. L., Myers, R. P., Peltekian, K. M., Ghent, C. N., Coltescu, C., Atkinson, E. J., Heathcote, E. J., Lazaridis, K. N., Amos, C. I., Siminovitch, K. A.
(2009). Primary Biliary Cirrhosis Associated with HLA, IL12A, and IL12RB2 Variants. NEJM
360: 2544-2555
[Abstract][Full Text]
Kiyohara, C, Washio, M, Horiuchi, T, Tada, Y, Asami, T, Ide, S, Takahashi, H, Kobashi, G, The Kyushu Sapporo SLE (KYSS) Study Group,
(2009). Cigarette smoking, N-acetyltransferase 2 polymorphisms and systemic lupus erythematosus in a Japanese population. Lupus
18: 630-638
[Abstract]
Rueda, B., Broen, J., Simeon, C., Hesselstrand, R., Diaz, B., Suarez, H., Ortego-Centeno, N., Riemekasten, G., Fonollosa, V., Vonk, M.C., van den Hoogen, F.H.J., Sanchez-Roman, J., Aguirre-Zamorano, M.A., Garcia-Portales, R., Pros, A., Camps, M.T., Gonzalez-Gay, M.A., Coenen, M.J.H., Airo, P., Beretta, L., Scorza, R., van Laar, J., Gonzalez-Escribano, M.F., Nelson, J.L., Radstake, T.R.D.J., Martin, J.
(2009). The STAT4 gene influences the genetic predisposition to systemic sclerosis phenotype. Hum Mol Genet
18: 2071-2077
[Abstract][Full Text]
PALOMINO-MORALES, R., VAZQUEZ-RODRIGUEZ, T. R., MORADO, I. C., CASTANEDA, S., ORTEGO-CENTENO, N., MIRANDA-FILLOY, J. A., LAMAS, J. R., MARTIN, J., GONZALEZ-GAY, M. A.
(2009). Lack of Association Between STAT4 Gene Polymorphism and Biopsy-proven Giant Cell Arteritis. The Journal of Rheumatology
36: 1021-1025
[Abstract][Full Text]
Jacob, C. O., Zhu, J., Armstrong, D. L., Yan, M., Han, J., Zhou, X. J., Thomas, J. A., Reiff, A., Myones, B. L., Ojwang, J. O., Kaufman, K. M., Klein-Gitelman, M., McCurdy, D., Wagner-Weiner, L., Silverman, E., Ziegler, J., Kelly, J. A., Merrill, J. T., Harley, J. B., Ramsey-Goldman, R., Vila, L. M., Bae, S.-C., Vyse, T. J., Gilkeson, G. S., Gaffney, P. M., Moser, K. L., Langefeld, C. D., Zidovetzki, R., Mohan, C.
(2009). Identification of IRAK1 as a risk gene with critical role in the pathogenesis of systemic lupus erythematosus. Proc. Natl. Acad. Sci. USA
106: 6256-6261
[Abstract][Full Text]
Dieguez-Gonzalez, R, Akar, S, Calaza, M, Perez-Pampin, E, Costas, J, Torres, M, Vicario, J L, Velloso, M L, Navarro, F, Narvaez, J, Joven, B, Herrero-Beaumont, G, Gonzalez-Alvaro, I, Fernandez-Gutierrez, B, de la Serna, A R, Carreno, L, Lopez-Longo, J, Caliz, R, Collado-Escobar, M D, Blanco, F J, Fernandez-Lopez, C, Balsa, A, Pascual-Salcedo, D, Gomez-Reino, J J, Gonzalez, A
(2009). Genetic variation in the nuclear factor {kappa}B pathway in relation to susceptibility to rheumatoid arthritis. Ann Rheum Dis
68: 579-583
[Abstract][Full Text]
Shimane, K, Kochi, Y, Yamada, R, Okada, Y, Suzuki, A, Miyatake, A, Kubo, M, Nakamura, Y, Yamamoto, K
(2009). A single nucleotide polymorphism in the IRF5 promoter region is associated with susceptibility to rheumatoid arthritis in the Japanese population. Ann Rheum Dis
68: 377-383
[Abstract][Full Text]
ICEN, M., NICOLA, P. J., MARADIT-KREMERS, H., CROWSON, C. S., THERNEAU, T. M., MATTESON, E. L., GABRIEL, S. E.
(2009). Systemic Lupus Erythematosus Features in Rheumatoid Arthritis and Their Effect on Overall Mortality. The Journal of Rheumatology
36: 50-57
[Abstract][Full Text]
Kariuki, S. N., Kirou, K. A., MacDermott, E. J., Barillas-Arias, L., Crow, M. K., Niewold, T. B.
(2009). Cutting Edge: Autoimmune Disease Risk Variant of STAT4 Confers Increased Sensitivity to IFN-{alpha} in Lupus Patients In Vivo. J. Immunol.
182: 34-38
[Abstract][Full Text]
Potter, C, Hyrich, K L, Tracey, A, Lunt, M, Plant, D, Symmons, D P M, Thomson, W, Worthington, J, Emery, P, Morgan, A W, Wilson, A G, Isaacs, J, Barton, A, BRAGGSS,
(2009). Association of rheumatoid factor and anti-cyclic citrullinated peptide positivity, but not carriage of shared epitope or PTPN22 susceptibility variants, with anti-tumour necrosis factor response in rheumatoid arthritis. Ann Rheum Dis
68: 69-74
[Abstract][Full Text]
Plenge, R. M.
(2008). Shared Genetic Risk Factors for Type 1 Diabetes and Celiac Disease. NEJM
359: 2837-2838
[Full Text]
Rhodes, B., Vyse, T. J.
(2008). The genetics of SLE: an update in the light of genome-wide association studies. Rheumatology (Oxford)
47: 1603-1611
[Abstract][Full Text]
O'Malley, J. T., Eri, R. D., Stritesky, G. L., Mathur, A. N., Chang, H.-C., HogenEsch, H., Srinivasan, M., Kaplan, M. H.
(2008). STAT4 Isoforms Differentially Regulate Th1 Cytokine Production and the Severity of Inflammatory Bowel Disease. J. Immunol.
181: 5062-5070
[Abstract][Full Text]
Isaacs, J. D.
(2008). Therapeutic T-cell manipulation in rheumatoid arthritis: past, present and future. Rheumatology (Oxford)
47: 1461-1468
[Abstract][Full Text]
Sigurdsson, S., Nordmark, G., Garnier, S., Grundberg, E., Kwan, T., Nilsson, O., Eloranta, M.-L., Gunnarsson, I., Svenungsson, E., Sturfelt, G., Bengtsson, A. A., Jonsen, A., Truedsson, L., Rantapaa-Dahlqvist, S., Eriksson, C., Alm, G., Goring, H. H.H., Pastinen, T., Syvanen, A.-C., Ronnblom, L.
(2008). A risk haplotype of STAT4 for systemic lupus erythematosus is over-expressed, correlates with anti-dsDNA and shows additive effects with two risk alleles of IRF5. Hum Mol Genet
17: 2868-2876
[Abstract][Full Text]
Lech, M., Kulkarni, O. P., Pfeiffer, S., Savarese, E., Krug, A., Garlanda, C., Mantovani, A., Anders, H.-J.
(2008). Tir8/Sigirr prevents murine lupus by suppressing the immunostimulatory effects of lupus autoantigens. JEM
205: 1879-1888
[Abstract][Full Text]
Barton, A., Thomson, W., Ke, X., Eyre, S., Hinks, A., Bowes, J., Gibbons, L., Plant, D., Wellcome Trust Case Control Consortium, , Wilson, A. G., Marinou, I., Morgan, A., Emery, P., YEAR consortium, , Steer, S., Hocking, L., Reid, D. M., Wordsworth, P., Harrison, P., Worthington, J.
(2008). Re-evaluation of putative rheumatoid arthritis susceptibility genes in the post-genome wide association study era and hypothesis of a key pathway underlying susceptibility. Hum Mol Genet
17: 2274-2279
[Abstract][Full Text]
Xiong, Q., Jiao, Y., Hasty, K. A., Stuart, J. M., Postlethwaite, A., Kang, A. H., Gu, W.
(2008). Genetic and Molecular Basis of Quantitative Trait Loci of Arthritis in Rat: Genes and Polymorphisms. J. Immunol.
181: 859-864
[Abstract][Full Text]
Ronnblom, L, Pascual, V
(2008). The innate immune system in SLE: type I interferons and dendritic cells. Lupus
17: 394-399
[Abstract]
Bowes, J., Barton, A.
(2008). Recent advances in the genetics of RA susceptibility. Rheumatology (Oxford)
47: 399-402
[Abstract][Full Text]
Sigurdsson, S., Goring, H. H.H., Kristjansdottir, G., Milani, L., Nordmark, G., Sandling, J. K., Eloranta, M.-L., Feng, D., Sangster-Guity, N., Gunnarsson, I., Svenungsson, E., Sturfelt, G., Jonsen, A., Truedsson, L., Barnes, B. J., Alm, G., Ronnblom, L., Syvanen, A.-C.
(2008). Comprehensive evaluation of the genetic variants of interferon regulatory factor 5 (IRF5) reveals a novel 5 bp length polymorphism as strong risk factor for systemic lupus erythematosus. Hum Mol Genet
17: 872-881
[Abstract][Full Text]
Crow, M. K.
(2008). Collaboration, Genetic Associations, and Lupus Erythematosus. NEJM
358: 956-961
[Full Text]
Hom, G., Graham, R. R., Modrek, B., Taylor, K. E., Ortmann, W., Garnier, S., Lee, A. T., Chung, S. A., Ferreira, R. C., Pant, P.V. K., Ballinger, D. G., Kosoy, R., Demirci, F. Y., Kamboh, M. I., Kao, A. H., Tian, C., Gunnarsson, I., Bengtsson, A. A., Rantapaa-Dahlqvist, S., Petri, M., Manzi, S., Seldin, M. F., Ronnblom, L., Syvanen, A.-C., Criswell, L. A., Gregersen, P. K., Behrens, T. W.
(2008). Association of Systemic Lupus Erythematosus with C8orf13-BLK and ITGAM-ITGAX. NEJM
358: 900-909
[Abstract][Full Text]
Dagna, L., Frontino, G., Praderio, L., Remmers, E. F., Plenge, R. M., Gregersen, P. K.
(2007). Rheumatoid Arthritis, Systemic Lupus Erythematosus, and STAT4. NEJM
357: 2517-2518
[Full Text]
Plenge, R. M., Seielstad, M., Padyukov, L., Lee, A. T., Remmers, E. F., Ding, B., Liew, A., Khalili, H., Chandrasekaran, A., Davies, L. R.L., Li, W., Tan, A. K.S., Bonnard, C., Ong, R. T.H., Thalamuthu, A., Pettersson, S., Liu, C., Tian, C., Chen, W. V., Carulli, J. P., Beckman, E. M., Altshuler, D., Alfredsson, L., Criswell, L. A., Amos, C. I., Seldin, M. F., Kastner, D. L., Klareskog, L., Gregersen, P. K.
(2007). TRAF1-C5 as a Risk Locus for Rheumatoid Arthritis -- A Genomewide Study. NEJM
357: 1199-1209
[Abstract][Full Text]