Background The causes and clinical course of acute rejectionvary, and it is not possible to predict graft outcome reliablyon the basis of available clinical, pathological, and geneticmarkers. We hypothesized that previously unrecognized molecularheterogeneity might underlie some of the variability in theclinical course of acute renal allograft rejection and in itsresponse to treatment.
Methods We used DNA microarrays in a systematic study of gene-expressionpatterns in biopsy samples from normal and dysfunctional renalallografts. A combination of exploratory and supervised bioinformaticmethods was used to analyze these profiles.
Results We found consistent differences among the gene-expressionpatterns associated with acute rejection, nephrotoxic effectsof drugs, chronic allograft nephropathy, and normal kidneys.The gene-expression patterns associated with acute rejectionsuggested at least three possible distinct subtypes of acuterejection that, although indistinguishable by light microscopy,were marked by differences in immune activation and cellularproliferation. Since the gene-expression patterns pointed tosubstantial variation in the composition of immune infiltrates,we used immunohistochemical staining to define these subtypesfurther. This analysis revealed a striking association betweendense CD20+ B-cell infiltrates and both clinical glucocorticoidresistance (P=0.01) and graft loss (P<0.001).
Conclusions Systematic analysis of gene-expression patternsprovides a window on the biology and pathogenesis of renal allograftrejection. Biopsy samples from patients with acute rejectionthat are indistinguishable on conventional histologic analysisreveal extensive differences in gene expression, which are associatedwith differences in immunologic and cellular features and clinicalcourse. The presence of dense clusters of B cells in a biopsysample was strongly associated with severe graft rejection,suggesting a pivotal role of infiltrating B cells in acute rejection.
Source Information
From the Departments of Pediatrics (M.S., M.-S.C., S.-C.H., T.S., O.S.), Pathology (N.K., M.M.), and Surgery (O.S.), Stanford University, Stanford, Calif.
Address reprint requests to Dr. Sarwal at the Department of Pediatrics, G320, 300 Pasteur Dr., Stanford, CA 94305, or at msarwal{at}stanford.edu.
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