Chromosome 1p and 11q Deletions and Outcome in Neuroblastoma
Edward F. Attiyeh, M.D., Wendy B. London, Ph.D., Yael P. Mossé, M.D., Qun Wang, M.D., Ph.D., Cynthia Winter, B.A., Deepa Khazi, M.S., Patrick W. McGrady, M.S., Robert C. Seeger, M.D., A. Thomas Look, M.D., Hiroyuki Shimada, M.D., Garrett M. Brodeur, M.D., Susan L. Cohn, M.D., Katherine K. Matthay, M.D., John M. Maris, M.D., for the Children's Oncology Group
Background Neuroblastoma is a childhood cancer with considerablemorbidity and mortality. Tumor-derived biomarkers may improverisk stratification.
Methods We screened 915 samples of neuroblastoma for loss ofheterozygosity (LOH) at chromosome bands 1p36 and 11q23. Additionalanalyses identified a subgroup of cases of 11q23 LOH with unbalanced11q LOH (unb11q LOH; defined as loss of 11q with retention of11p). The associations of LOH with relapse and survival weredetermined.
Results LOH at 1p36 was identified in 209 of 898 tumors (23percent) and LOH at 11q23 in 307 of 913 (34 percent). Unb11qLOH was found in 151 of 307 tumors with 11q23 LOH (17 percentof the total cohort). There was a strong association of 1p36LOH, 11q23 LOH, and unb11q LOH with most high-risk disease features(P<0.001). LOH at 1p36 was associated with amplificationof the MYCN oncogene (P<0.001), but 11q23 LOH and unb11qLOH were not (P<0.001 and P=0.002, respectively). Cases withunb11q LOH were associated with three-year event-free and overallsurvival rates (±SE) of 50±5 percent and 66±5percent, respectively, as compared with 74±2 percentand 83±2 percent among cases without unb11q LOH (P<0.001for both comparisons). In a multivariate model, unb11q LOH wasindependently associated with decreased event-free survival(P=0.009) in the entire cohort, and both 1p36 LOH and unb11qLOH were independently associated with decreased progression-freesurvival in the subgroup of patients with features of low-riskand intermediate-risk disease (P=0.002 and P=0.02, respectively).
Conclusions Unb11q LOH and 1p36 LOH are independently associatedwith a worse outcome in patients with neuroblastoma.
Source Information
From Children's Hospital of Philadelphia, University of Pennsylvania School of Medicine, and Abramson Family Cancer Research Institute, Philadelphia (E.F.A., Y.P.M., Q.W., C.W., D.K., G.M.B., J.M.M.); the Children's Oncology Group, Arcadia, Calif. (E.F.A., W.B.L., Y.P.M., Q.W., D.K., P.W.M., R.C.S., A.T.L., H.S., G.M.B., S.L.C., K.K.M., J.M.M.); the Department of Statistics, University of Florida, and Children's Oncology Group, Gainesville (W.B.L., P.W.M.); Children's Hospital of Los Angeles, Los Angeles (R.C.S., H.S.); DanaFarber Cancer Institute, Harvard Medical School, Boston (A.T.L.); the Feinberg School of Medicine, Northwestern University, Chicago (S.L.C.); and the University of California, San Francisco, School of Medicine, San Francisco (K.K.M.).
Address reprint requests to Dr. Maris at the Division of Oncology, Children's Hospital of Philadelphia, Abramson Pediatric Research Center 902A, 3615 Civic Center Blvd., Philadelphia, PA 19104-4318, or at maris{at}email.chop.edu.
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